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Unintended laboratory-driven evolution reveals genetic requirements for biofilm formation by Desulfovibrio vulgaris Hildenborough

De León et al.. 2017; 
Kara B. De León,a Grant M. Zane,a Valentine V. Trotter,b Gregory P. Krantz,c,d Adam P. Arkin,b,e Gareth P. Butland,b Peter J. Walian,f Matthew W. Fields,c,d Judy D. Walla
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Peptide Synthesis Candidate amino acid sequences were assessed for solubility, antigenicity, and surface probability, among other characteristics, with proprietary software (OptimumAntigen; GenScript, Piscataway, NJ) and codon optimized. Peptides for the target regions (LGTLDPLVFERGTEC for DVU1012, GLESPTSAQESDGAC for DVU1545) were synthesizedand used to obtain polyclonal antibodies (rabbit), which in turn were affinity purified against these peptides (GenScript). Get A Quote

摘要

Biofilms of sulfate-reducing bacteria (SRB) are of particular interest as members of this group are culprits in corrosion of industrial metal and concrete pipelines as well as being key players in subsurface metal cycling. Yet the mechanism of biofilm formation by these bacteria has not been determined. Here we show that two supposedly identical wild-type cultures of the SRB Desulfovibrio vulgaris Hildenborough maintained in different laboratories have diverged in biofilm formation. From genome resequencing and subsequent mutant analyses, we discovered that a single nucleotide change within DVU1017, the ABC transporter of a type I secretion system (T1SS), was sufficient to eliminate biofilm formation in D. vulg... More

关键词

Desulfovibrio vulgaris, biofilms, genetic polymorphisms, secretion systems, sulfate reduction
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