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Eliminating a Protein Folding Intermediate by Tuning a Local Hydrophobic Contact.

J Phys Chem B. 2019-04; 
KachlishviliKhatuna,DaveKapil,GruebeleMartin,ScheragaHarold A,MaisuradzeG
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Peptide Synthesis … Thermodynamic Characterization. Leu26Asp and Leu26Trp were both custom-synthesized (Genscript corp., NJ) to >98% purity. The peptides were then dissolved in sodium phosphate buffer (pH 7.0) to a required concentration … Get A Quote

摘要

Intermediate states in protein folding may slow folding, and sometimes can provide a starting point for aggregation. Recently, the FBP28 WW domain of the formin-binding protein was used as a model for a computational study of the origin and prevention of intermediate-state formation, and local hydrophobic interactions of Leu26 were implicated. Here, we combine new simulations over a broad temperature range with experimental temperature-jump data to study this site in more detail. We replace Leu26 by Asp26 or Trp26 to alter the folding scenario from three-state folding toward two-state or downhill folding at temperatures below the melting point, whereas the wild type shows two-state behavior only near ... More

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