Products/Services Used | Details | Operation |
---|---|---|
Monoclonal Antibody Services> | LIN28B and β-actin were detected using an anti-LIN28B antibody (Cell Signaling Technology, no. 4196) and an anti-ACTB mouse monoclonal antibody (GenScript, A00702), respectively. | Get A Quote |
Transposable elements (TEs) are an abundant and rich genetic resource of regulatory sequences1-3. Cryptic regulatory elements within TEs can be epigenetically reactivated in cancer to influence oncogenesis in a process termed onco-exaptation4. However, the prevalence and impact of TE onco-exaptation events across cancer types are poorly characterized. Here, we analyzed 7,769 tumors and 625 normal datasets from 15 cancer types, identifying 129 TE cryptic promoter-activation events involving 106 oncogenes across 3,864 tumors. Furthermore, we interrogated the AluJb-LIN28B candidate: the genetic deletion of the TE eliminated oncogene expression, while dynamic DNA methylation modulated promoter activity, illustratin... More