Products/Services Used | Details | Operation |
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Catalog Antibody> | WolfPSort 0.2 (http://www.genscript.com/psort/wolf psort.html) for protein localization were used according to an established bioinformatics pipeline (Brown, Antoniw and Hammond-Kosack 2012). | Get A Quote |
The genome sequence of Tricholoma vaccinum was obtained to predict its secretome in order to elucidate communication of T. vaccinum with its host tree spruce (Picea abies) in interkingdom signaling. The most prominent protein domains within the 206 predicted secreted proteins belong to energy and nutrition (52%), cell wall degradation (19%) and mycorrhiza establishment (9%). Additionally, we found small secreted proteins that show typical features of effectors potentially involved in host communication. From the secretome, 22 proteins could be identified, two of which showed higher protein abundances after spruce root exudate exposure, while five were downregulated in this treatment. The changes in T. vaccinum ... More