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Discovery of a novel small molecular peptide that disrupts helix 34 of bacterial ribosomal RNA

RSC Adv. 2019; 
Keshav GC,  Davidnhan To,  Kumudie Jayalath and Sanjaya Abeysirigunawardena
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Codon Optimization Concentrations of purified phage DNA fragments in ng μL−1 were determined (Thermo scientific Nanodrop One) before sending for Sanger sequencing (GenScript Inc.). DNA sequences were analyzed using bioinformatics software and tools {Codon Code aligner, Reverse Complement tool, translate tool from ExPaSy (Bioinformatics Resource Portal), and Clustal Omega (EMBL-EBI, the European Bioinformatics Institute)}. Get A Quote

摘要

Despite the advances in modern medicine, antibiotic resistance is a persistent and growing threat to the world. Thus, the discovery and development of novel antibiotics have become crucial to combat multi-drug resistant pathogens. The goal of our research is to discover a small molecular peptide that can disrupt the synthesis of new ribosomes. Using the phage display technique, we have discovered a 7-mer peptide that binds to the second strand of 16S h34 RNA with a dissociation constant in the low micromolar range. Binding of the peptide alters RNA structure and inhibits the binding of the ribosomal RNA small subunit methyltransferase C (RsmC) enzyme that methylates the exocyclic amine of G1207. The addition of... More

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