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Evolutionary relationships and sequence-structure determinants in human SARS coronavirus-2 spike proteins for host receptor recognition

Proteins. 2020-06; 
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Recombinant Proteins … Coronaviruses (CoVs) are single-stranded, positive-sense RNA viruses closely related to animal … is generally thought to share a common ancestor with porcine respiratory coronavirus (PRCV) [13 … genome of TGEV WH-1 was determined by sequencing (GenScript, Nanjing, China … Get A Quote

摘要

Coronavirus disease 2019 (COVID-19) is a pandemic infectious disease caused by novel Severe Acute Respiratory Syndrome coronavirus-2 (SARS CoV-2). The SARS CoV-2 is transmitted more rapidly and readily than SARS CoV. Both, SARS CoV and SARS CoV-2 via their glycosylated spike proteins recognize the human angiotensin converting enzyme-2 (ACE-2) receptor. We generated multiple sequence alignments and phylogenetic trees for representative spike proteins of SARS CoV and SARS CoV-2 from various host sources in order to analyze the specificity in SARS CoV-2 spike proteins required for causing infection in humans. Our results show that among the genomes analysed, two sequence regions in the N-terminal domain (NTD); "ME... More

关键词

Complete genomes, Multiple sequence alignment, Phylogenetic tree, Receptor binding domain, Severe acute respiratory syndrome coronavirus-2, Spike proteins
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