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In Silico Analysis of Synaptonemal Complex Protein 1 (SYCP1) and Acrosin Binding Protein (ACRBP) Antigens to Design Novel Multiepitope Peptide Cancer Vaccine …

International Journal of Peptide Research and Therapeutics. 2018-10; 
Ashkan Safavi, Amirhosein Kefayat, Fattah Sotoodehnejadnematalahi, Mansoor Salehi & Mohammad Hossein Modarressi
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Codon Optimization … The CAI-values were calculated by applying an algorithm from A Carbone et al For more analyzes, GenScript (https://wwwgenscriptcom/tools/rare-codon-analysis) was utilized which can calculate GC content and codon frequency distribution (CFD) … Get A Quote

摘要

Multiepitope cancer vaccines are manifesting as the future of breast cancer immunotherapy. In the present study, high immunogenic fragments of synaptonemal complex protein 1 (SYCP1) and acrosin binding protein (ACRBP) antigens were selected according to MHCs binding affinity and CD8+ cytotoxic T lymphocytes’ (CTL) epitopes by various immunoinformatic servers. (RCQHKIAEMVALMEKHKHQYDKI) residue from p702–724 SYCP1 and the (YIQYPNYCSFKSQQCL) residue from p481–496 ACRBP were selected as the immunodominant fragments. Then, the selected fragments were fused together with a furin-sensitive linker to form the final peptide vaccine construct. The cleavage sites, TAP transport efficiency, CTL epitopes, post-transla... More

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