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Dodine as a Protein Denaturant: The Best of Two Worlds?

J Phys Chem B.. 2013-7; 
Hannah Gelman , Tatyana Perlova , Martin Gruebele. Department of Chemistry and Center for Biophysics and Computational Biology, University of Illinois, Urbana, Illinois 61801, United States.
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摘要

Traditional denaturants such as urea and guanidinium ion unfold proteins in a cooperative "all-or-none" fashion. However, their high working concentration in combination with their strong absorption in the far ultraviolet region make it impossible to measure high quality circular dichroism or infrared spectra, which are commonly used to detect changes in protein secondary structure. On the other hand, detergents such as dodecyl sulfate destabilize native protein conformation at low millimolar concentrations and are UV transparent, but they do denature proteins more gradually than guanidinium or urea. In this work we studied the denaturation properties of the fungicide dodecylguanidinium acetate (dodin... More

关键词

fluorescence; tryptophan; lambda repressor; WW domain; membrane protein; guanidine hydrochloride; sodium dodecyl sulfate(SDS).
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