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Endogenous retroviral proteins provide an immunodominant but not requisite antigen in a murine immunotherapy tumor model

Oncoimmunology. 2020; 
Xuan Ye, Janelle C Waite, Ankur Dhanik, Namita Gupta, Maggie Zhong, Christina Adler, Evangelia Malahias, Min Ni, Yi Wei, Cagan Gurer, Wen Zhang, Lynn E Macdonald, Andrew J Murphy, Matthew A Sleeman, Dimitris Skokos
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Stable Cell Lines … A total of 1μg of NLS-Cas9-EGFP nuclease (Genscript) and 240 ng of sgRNA … Alignment of the p15E transcripts from MC38 and these B16 derivative cell lines shows … observed multiple proteasome genes were differentially expressed between MC38 and B16 derivatives, such as … Get A Quote

摘要

Clinical observations suggest that responses to cancer immunotherapy are correlated with intra-tumoral T cell receptor (TCR) clonality, tumor mutation burden (TMB) and host HLA genotype, highlighting the importance of host T cell recognition of tumor antigens. However, the dynamic interplay between T cell activation state and changes in TCR repertoire in driving the identification of potential immunodominant antigen(s) remains largely unexplored. Here, we performed single-cell RNA-sequencing on CD8 tumor-infiltrating T cells (TILs) using the murine colorectal tumor model MC38 to identify unique TCR sequences and validate their tumor reactivity. We found that the majority of clonally expanded TILs are tumor-reac... More

关键词

MC38, TCR, endogenous retrovirus, m8, p15E, single cell sequencing, tumor antigen
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