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Genome-Wide Identification of Apple Ubiquitin SINA E3 Ligase and Functional Characterization of MdSINA2

Front Plant Sci. 2020; 
Hong-Liang Li, Xun Wang, Xing-Long Ji, Zhi-Wen Qiao, Chun-Xiang You, Yu-Jin Hao
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Gene Synthesis … protparam/). Subcellular localizations of MdSINAs were predicted by WoLF PSORT II (https://www.genscript.com/wolf-psort.html) (Horton et al., 2007). Multiple Sequence Alignment and Phylogenetic Analysis. Clustal Omega … Get A Quote

摘要

SINA (Seven in absentia) proteins are a small family of ubiquitin ligases that play important roles in regulating plant growth and developmental processes as well as in responses to diverse types of biotic and abiotic stress. However, the characteristics of the apple SINA family have not been previously studied. Here, we identified 11 members in the apple genome based on their conserved, N-terminal RING and C-terminal SINA domains. We also reconstructed a phylogeny of these genes; characterized their chromosomal location, structure, and motifs; and identified two major groups of genes. Subsequent qRT-PCR analyses were used to characterize the expression of genes in various tissues and organs, and levels of e... More

关键词

ABA sensitivity, MdSINA2, apple, bioinformatics analysis, expression analysis
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