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BioParts-A Biological Parts Search Portal and Updates to the ICE Parts Registry Software Platform

ACS Synth Biol. 2021-08; 
Hector A Plahar, Thomas N Rich, Stephen D Lane, William C Morrell, Leanne Springthorpe, Oge Nnadi, Elena Aravina, Tiffany Dai, Michael J Fero, Nathan J Hillson, Christopher J Petzold
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Gene Synthesis … Physical samples for a subset of these parts are also readily available, thanks to repositories such as Addgene and GenScript, that store … Support for samples stored in community resources such as Addgene and GenScript is also available (Figure 5C,D). Users are thus able to … Get A Quote

摘要

Capturing, storing, and sharing biological DNA parts data are integral parts of synthetic biology research. Here, we detail updates to the ICE biological parts registry software platform that enable these processes, describe our implementation of the Web of Registries concept using ICE, and establish Bioparts, a search portal for biological parts available in the public domain. The Web of Registries enables standalone ICE installations to securely connect and form a distributed parts database. This distributed database allows users from one registry to query and access plasmid, strain, (DNA) part, plant seed, and protein entry types in other connected registries. Users can also transfer entries from one ICE reg... More

关键词

Bioparts.org, OpenVectorEditor, Web of Registries, biological parts search engine, multiplatform, repository, sharing, synthetic biology
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