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Properdin oligomers adopt rigid extended conformations supporting function

Elife. 2021-01; 
Dennis V Pedersen, Martin Nors Pedersen, Sofia Mm Mazarakis, Yong Wang, Kresten Lindorff-Larsen, Lise Arleth, Gregers R Andersen
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Proteins, Expression, Isolation and Analysis The samples were analyzed under non-reducing conditions on a 12% SDS–PAGE gel (GenScript) using the SilverQuest silver staining kit (Invitrogen) Get A Quote

摘要

Properdin stabilizes convertases formed upon activation of the complement cascade within the immune system. The biological activity of properdin depends on the oligomerization state, but whether properdin oligomers are rigid and how their structure links to function remains unknown. We show by combining electron microscopy and solution scattering, that properdin oligomers adopt extended rigid and well-defined conformations which are well approximated by single models of apparent n-fold rotational symmetry with dimensions of 230-360 Å. Properdin monomers are pretzel-shaped molecules with limited flexibility. In solution, properdin dimers are curved molecules, whereas trimers and tetramers are close to being pla... More

关键词

MD simulation, SAXS, complement, electron microscopy, human, immunology, inflammation, molecular biophysics, protease, structural biology
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