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The dynamical response of hen egg white lysozyme to the binding of a carbohydrate ligand.

Protein Sci.. 2012-07;  21(7):1066-73
Veronica R. Moorman, Kathleen G. Valentine, A. Joshua Wand. Graduate Group in Biochemistry & Molecular Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6059
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摘要

It has become clear that the binding of small and large ligands to proteins can invoke significant changes in side chain and main chain motion in the fast picosecond to nanosecond timescale. Recently, the use of a “dynamical proxy” has indicated that changes in these motions often reflect significant changes in conformational entropy. These entropic contributions are sometimes of the same order as the total entropy of binding. Thus, it is important to understand the connections amongst motion between the manifold of states accessible to the native state of proteins, the corresponding entropy, and how this impacts the overall energetics of protein function. The interaction of proteins with carbohydra... More

关键词

hen egg white lysozyme;carbohydrate binding;conformational entropy;NMR relaxation;backbone and methyl side chain dynamics
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