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Biochemical reconstitution and genetic characterization of the major oxidative damage base excision DNA repair pathway in Thermococcus kodakarensis.

DNA Repair (Amst). 2020; 
Gehring AM, Zatopek KM, Burkhart BW, Potapov V, Santangelo TJ, Gardner AF.
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Codon Optimization … coli codon optimized version of the genes encoding TkoAGOG (GenBank BAD85129.1), and TkoEndoIV (GenBank BAD84359.1) from T. kodakarensis were synthetically constructed and cloned into pAII17 vector via the NdeI and BamHI sites (Genscript, Piscataway, NJ) … Get A Quote

摘要

Reactive oxygen species drive the oxidation of guanine to 8-oxoguanine (8oxoG), which threatens genome integrity. The repair of 8oxoG is carried out by base excision repair enzymes in Bacteria and Eukarya, however, little is known about archaeal 8oxoG repair. This study identifies a member of the Ogg-subfamily archaeal GO glycosylase (AGOG) in Thermococcus kodakarensis, an anaerobic, hyperthermophilic archaeon, and delineates its mechanism, kinetics, and substrate specificity. TkoAGOG is the major 8oxoG glycosylase in T. kodakarensis, but is non-essential. In addition to TkoAGOG, the major apurinic/apyrimidinic (AP) endonuclease (TkoEndoIV) required for archaeal base excision repair and cell viability was ident... More

关键词

8oxo-guanine (8-oxoG); AP endonuclease; Archaea; Base excision repair (BER); DNA glycosylase; DNA polymerase; DNA repair; Genetics; Nucleic acid enzymology
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