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Protein-Peptide Binding Energetics under Crowded Conditions

J Phys Chem B. 2020; 
Samantha S Stadmiller, Jhoan S Aguilar, Stuart Parnham, Gary J Pielak
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Peptide Synthesis … prepared as described.42, 56 The 12-residue peptides, YRAVPPPLPPRR (PepS2) and GELSPPPIPPRL (PepS4), were purchased from GenScript, where they were HPLC purified to >98%. The net peptide content was determined by GenScript via elemental nitrogen analysis … Get A Quote

摘要

Nearly all biological processes, including strictly regulated protein-protein interactions fundamental in cell signaling, occur inside living cells where the concentration of macromolecules can exceed 300 g/L. One such interaction is between a 7 kDa SH3 domain and a 25 kDa intrinsically disordered region of Son of Sevenless (SOS). Despite its key role in the mitogen activated protein kinase signaling pathway of all eukaryotes, most biophysical characterizations of this complex are performed in dilute buffered solutions where cosolute concentrations rarely exceed 10 g/L. Here, we investigate the effects of proteins, sugars, and urea, at high g/L concentrations, on the kinetics and equilibrium thermodynamics of b... More

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