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Polycomb repression of Hox genes involves spatial feedback but not domain compaction or phase transition

Nat Genet. 2024-02; 
Sedona Eve Murphy, Alistair Nicol Boettiger
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Custom DNA/RNA Oligos … line in which the endogenous Cbx7 gene had been modified to … hox RNA transcripts with additional genes added as a positive … libraries were ordered as an oligo-pool from Genscript. … Get A Quote

摘要

Polycomb group proteins have a critical role in silencing transcription during development. It is commonly proposed that Polycomb-dependent changes in genome folding, which compact chromatin, contribute directly to repression by blocking the binding of activating complexes. Recently, it has also been argued that liquid-liquid demixing of Polycomb proteins facilitates this compaction and repression by phase-separating target genes into a membraneless compartment. To test these models, we used Optical Reconstruction of Chromatin Architecture to trace the Hoxa gene cluster, a canonical Polycomb target, in thousands of single cells. Across multiple cell types, we find that Polycomb-bound chromatin frequently explor... More

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